Division of Enteric Diseases, Center for Infectious Diseases, National Research Institute of Health, Osong, Korea
Copyright © 2017 Korea Centers for Disease Control and Prevention
This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
CONFLICTS OF INTEREST
No potential conflict of interest relevant to this article was reported.
Target gene | Sequence (5′ to 3′) | Size (bp) | Reference |
---|---|---|---|
entFM | CAAAGACTTCGTAACAAAAGGTGGT | 290 | Yang et al, 2005 [7] |
TGTTTACTCCGCCTTTTACAAACTT | |||
nheA | ATTACAGGGTTATTGGTTACAGCAGT | 475 | Yang et al, 2005 [7] |
AATCTTGCTCCATACTCTCTTGGATGCT | |||
cytK2 | CAATCCCTGGCGCTAGTGCA | 585 | Guinebretirere et al, 2006 [12] |
GTGTAGCCTGGACGAAGTTGG | |||
hblC | CCTATCAATACTCTCGCAACACCAAT | 386 | Yang et al, 2005 [7] |
TTTTCTTGATTCGTCATAGCCATTTCT | |||
bceT | AGCTTGGAGCGGAGCAGACTATGT | 701 | Yang et al, 2005 [7] |
GTATTTCTTTCCCGCTTGCCTTTT | |||
cer | ATCATAAAGGTGCGAACAAGA | 188 | Kim et al, 2010 [22] |
AAGATCAACCGAATGCAACTG |
Target gene | entFM* | nheA* | cytK2* | hblC* | bceT* | cer* |
---|---|---|---|---|---|---|
Total strains (n = 667) | 567 (85.0) | 524 (78.6) | 297 (44.5) | 244 (36.6) | 198 (29.7) | 135 (20.2) |
Non-emetic strains (n = 532) | 462 (86.8) | 444 (83.5) | 273 (51.3) | 228 (42.9) | 181 (34.0) | 0 (0) |
Emetic strains (n = 135) | 105 (77.8) | 80 (59.3) | 24 (17.8) | 16 (11.9) | 17 (12.6) | 135 (100) |
Target gene | Sequence (5′ to 3′) | Size (bp) | Reference |
---|---|---|---|
entFM | CAAAGACTTCGTAACAAAAGGTGGT | 290 | Yang et al, 2005 [ |
TGTTTACTCCGCCTTTTACAAACTT | |||
nheA | ATTACAGGGTTATTGGTTACAGCAGT | 475 | Yang et al, 2005 [ |
AATCTTGCTCCATACTCTCTTGGATGCT | |||
cytK2 | CAATCCCTGGCGCTAGTGCA | 585 | Guinebretirere et al, 2006 [ |
GTGTAGCCTGGACGAAGTTGG | |||
hblC | CCTATCAATACTCTCGCAACACCAAT | 386 | Yang et al, 2005 [ |
TTTTCTTGATTCGTCATAGCCATTTCT | |||
bceT | AGCTTGGAGCGGAGCAGACTATGT | 701 | Yang et al, 2005 [ |
GTATTTCTTTCCCGCTTGCCTTTT | |||
cer | ATCATAAAGGTGCGAACAAGA | 188 | Kim et al, 2010 [ |
AAGATCAACCGAATGCAACTG |
Target gene | entFM | nheA | cytK2 | hblC | bceT | cer |
---|---|---|---|---|---|---|
Total strains (n = 667) | 567 (85.0) | 524 (78.6) | 297 (44.5) | 244 (36.6) | 198 (29.7) | 135 (20.2) |
Non-emetic strains (n = 532) | 462 (86.8) | 444 (83.5) | 273 (51.3) | 228 (42.9) | 181 (34.0) | 0 (0) |
Emetic strains (n = 135) | 105 (77.8) | 80 (59.3) | 24 (17.8) | 16 (11.9) | 17 (12.6) | 135 (100) |
Strains | Group | entFM | nheA | cytK2 | hblC | bceT | cer | Strains, n (%) |
---|---|---|---|---|---|---|---|---|
Non-emetic strains (n = 532) | A | + | + | + | + | + | − | 77 (14.5) |
B | + | + | + | + | − | − | 71 (13.3) | |
C | + | + | + | − | − | − | 35 (6.6) | |
D | + | + | + | − | + | − | 33 (6.2) | |
E | + | + | − | + | + | − | 9 (1.7) | |
F | + | + | − | − | + | − | 20 (3.8) | |
G | + | + | − | + | − | − | 25 (4.7) | |
H | + | + | − | − | − | − | 125 (23.5) | |
I | + | − | + | + | + | − | 6 (1.1) | |
J | + | − | + | − | + | − | 10 (1.9) | |
K | + | − | + | + | − | − | 6 (1.1) | |
L | + | − | + | − | − | − | 10 (1.9) | |
M | + | − | − | + | + | − | 1 (0.2) | |
N | + | − | − | − | + | − | 7 (1.3) | |
O | + | − | − | + | − | − | 5 (0.9) | |
P | + | − | − | − | − | − | 22 (4.1) | |
Q | − | + | + | + | + | − | 3 (0.6) | |
R | − | + | + | + | − | − | 6 (1.1) | |
S | − | + | + | − | − | − | 9 (1.7) | |
T | − | + | − | + | + | − | 2 (0.4) | |
U | − | + | − | − | + | − | 1 (0.2) | |
V | − | + | − | + | − | − | 3 (0.6) | |
W | − | + | − | − | − | − | 25 (4.7) | |
X | − | − | + | − | + | − | 2 (0.4) | |
Y | − | − | + | + | − | − | 1 (0.2) | |
a | − | − | + | − | − | − | 4 (0.8) | |
b | − | − | − | + | + | − | 9 (1.7) | |
c | − | − | − | + | − | − | 4 (0.8) | |
d | − | − | − | − | + | − | 1 (0.2) | |
Emetic strains (n = 135) | A | + | + | + | + | + | + | 3 (2.2) |
B | + | + | + | + | − | + | 4 (3.0) | |
C | + | + | + | − | + | + | 4 (3.0) | |
D | + | + | + | − | − | + | 1 (0.7) | |
E | + | + | − | + | − | + | 1 (0.7) | |
F | + | + | − | − | − | + | 56 (41.5) | |
G | + | + | − | − | + | + | 4 (3.0) | |
H | + | − | + | + | − | + | 4 (3.0) | |
I | + | − | + | + | + | + | 2 (1.5) | |
J | + | − | + | − | − | + | 1 (0.7) | |
K | + | − | + | − | + | + | 1 (0.7) | |
L | + | − | − | + | + | + | 1 (0.7) | |
M | + | − | − | − | + | + | 1 (0.7) | |
N | + | − | − | − | − | + | 22 (16.3) | |
O | − | + | + | − | − | + | 1 (0.7) | |
P | − | + | − | + | − | + | 1 (0.7) | |
Q | − | + | − | − | − | + | 5 (3.7) | |
R | − | − | + | − | + | + | 1 (0.7) | |
S | − | − | + | − | − | + | 2 (1.5) | |
T | − | − | − | − | − | + | 20 (14.8) |
Values are presented as number (%).